Package: metacom 1.5.3
metacom: Analysis of the 'Elements of Metacommunity Structure'
Functions to analyze coherence, boundary clumping, and turnover following the pattern-based metacommunity analysis of Leibold and Mikkelson 2002 <doi:10.1034/j.1600-0706.2002.970210.x>. The package also includes functions to visualize ecological networks, and to calculate modularity as a replacement to boundary clumping.
Authors:
metacom_1.5.3.tar.gz
metacom_1.5.3.zip(r-4.5)metacom_1.5.3.zip(r-4.4)metacom_1.5.3.zip(r-4.3)
metacom_1.5.3.tgz(r-4.4-any)metacom_1.5.3.tgz(r-4.3-any)
metacom_1.5.3.tar.gz(r-4.5-noble)metacom_1.5.3.tar.gz(r-4.4-noble)
metacom_1.5.3.tgz(r-4.4-emscripten)metacom_1.5.3.tgz(r-4.3-emscripten)
metacom.pdf |metacom.html✨
metacom/json (API)
NEWS
| # Install 'metacom' in R: |
| install.packages('metacom', repos = c('https://taddallas.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/taddallas/metacom/issues
- TestMatrices - Test matrices used to evaluate metacommunity functions
Last updated 2 years agofrom:7ddba6e7e2. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 23 2024 |
| R-4.5-win | NOTE | Nov 23 2024 |
| R-4.5-linux | NOTE | Nov 23 2024 |
| R-4.4-win | NOTE | Nov 23 2024 |
| R-4.4-mac | NOTE | Nov 23 2024 |
| R-4.3-win | NOTE | Nov 23 2024 |
| R-4.3-mac | NOTE | Nov 23 2024 |
Exports:BoundaryClumpCoherenceImagineMetacommunityNullMakerOrderMatrixTurnover
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Pattern-based analysis of metacommunity structure | metacom-package metacom |
| Determines boundary clumping | BoundaryClump |
| Determines coherence | Coherence |
| Plotting of site-by-species interaction matrices | Imagine |
| Analysis of the Elements of Metacommunity Structure | Metacommunity |
| Null matrix creator | NullMaker |
| Ordinates interaction matrix | OrderMatrix |
| Test matrices used to evaluate metacommunity functions | TestMatrices |
| Determines species turnover | Turnover |
